Scientific name | Muntiacus reevesi |
Common name | Reeves's muntjac |
Maximum lifespan | 23.20 years (Muntiacus reevesi@AnAge) |
Total mtDNA (size: 16354 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 6190 | 10164 | 3990 | 2200 | 4744 | 5420 |
Base content per 1 kb (bases) | 379 | 621 | 244 | 135 | 290 | 331 |
Base content (%) | 37.9% | 62.1% |
Total protein-coding genes (size: 11341 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 4312 | 7029 | 2930 | 1382 | 3384 | 3645 |
Base content per 1 kb (bases) | 380 | 620 | 258 | 122 | 298 | 321 |
Base content (%) | 38.0% | 62.0% |
D-loop (size: 919 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 359 | 560 | 219 | 140 | 287 | 273 |
Base content per 1 kb (bases) | 391 | 609 | 238 | 152 | 312 | 297 |
Base content (%) | 39.1% | 60.9% |
Total tRNA-coding genes (size: 1517 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 551 | 966 | 314 | 237 | 425 | 541 |
Base content per 1 kb (bases) | 363 | 637 | 207 | 156 | 280 | 357 |
Base content (%) | 36.3% | 63.7% |
Total rRNA-coding genes (size: 2526 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 949 | 1577 | 516 | 433 | 636 | 941 |
Base content per 1 kb (bases) | 376 | 624 | 204 | 171 | 252 | 373 |
Base content (%) | 37.6% | 62.4% |
12S rRNA gene (size: 959 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 379 | 580 | 207 | 172 | 233 | 347 |
Base content per 1 kb (bases) | 395 | 605 | 216 | 179 | 243 | 362 |
Base content (%) | 39.5% | 60.5% |
16S rRNA gene (size: 1567 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 570 | 997 | 309 | 261 | 403 | 594 |
Base content per 1 kb (bases) | 364 | 636 | 197 | 167 | 257 | 379 |
Base content (%) | 36.4% | 63.6% |
ATP6 (size: 681 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 267 | 414 | 185 | 82 | 204 | 210 |
Base content per 1 kb (bases) | 392 | 608 | 272 | 120 | 300 | 308 |
Base content (%) | 39.2% | 60.8% |
ATP8 (size: 201 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 61 | 140 | 49 | 12 | 59 | 81 |
Base content per 1 kb (bases) | 303 | 697 | 244 | 60 | 294 | 403 |
Base content (%) | 30.3% | 69.7% |
COX1 (size: 1545 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 611 | 934 | 359 | 252 | 484 | 450 |
Base content per 1 kb (bases) | 395 | 605 | 232 | 163 | 313 | 291 |
Base content (%) | 39.5% | 60.5% |
COX2 (size: 684 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 248 | 436 | 154 | 94 | 200 | 236 |
Base content per 1 kb (bases) | 363 | 637 | 225 | 137 | 292 | 345 |
Base content (%) | 36.3% | 63.7% |
COX3 (size: 784 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 334 | 450 | 220 | 114 | 235 | 215 |
Base content per 1 kb (bases) | 426 | 574 | 281 | 145 | 300 | 274 |
Base content (%) | 42.6% | 57.4% |
CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 449 | 691 | 302 | 147 | 338 | 353 |
Base content per 1 kb (bases) | 394 | 606 | 265 | 129 | 296 | 310 |
Base content (%) | 39.4% | 60.6% |
ND1 (size: 957 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 370 | 587 | 252 | 118 | 292 | 295 |
Base content per 1 kb (bases) | 387 | 613 | 263 | 123 | 305 | 308 |
Base content (%) | 38.7% | 61.3% |
ND2 (size: 1044 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 360 | 684 | 262 | 98 | 308 | 376 |
Base content per 1 kb (bases) | 345 | 655 | 251 | 94 | 295 | 360 |
Base content (%) | 34.5% | 65.5% |
ND3 (size: 346 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 131 | 215 | 90 | 41 | 106 | 109 |
Base content per 1 kb (bases) | 379 | 621 | 260 | 118 | 306 | 315 |
Base content (%) | 37.9% | 62.1% |
ND4 (size: 1378 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 526 | 852 | 374 | 152 | 421 | 431 |
Base content per 1 kb (bases) | 382 | 618 | 271 | 110 | 306 | 313 |
Base content (%) | 38.2% | 61.8% |
ND4L (size: 297 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 108 | 189 | 70 | 38 | 100 | 89 |
Base content per 1 kb (bases) | 364 | 636 | 236 | 128 | 337 | 300 |
Base content (%) | 36.4% | 63.6% |
ND5 (size: 1821 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 673 | 1148 | 476 | 197 | 541 | 607 |
Base content per 1 kb (bases) | 370 | 630 | 261 | 108 | 297 | 333 |
Base content (%) | 37.0% | 63.0% |
ND6 (size: 528 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 192 | 336 | 149 | 43 | 119 | 217 |
Base content per 1 kb (bases) | 364 | 636 | 282 | 81 | 225 | 411 |
Base content (%) | 36.4% | 63.6% |
ATP6 (size: 681 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
19 | 6 | 10 | 13 | 5 | 16 | 3 | 7 | 8 | 1 | 1 | 1 | 5 | 2 | 7 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 0 | 0 | 2 | 9 | 6 | 0 | 2 | 3 | 6 | 1 | 3 | 1 | 7 | 1 | 6 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
6 | 13 | 1 | 2 | 2 | 4 | 1 | 3 | 2 | 1 | 1 | 1 | 0 | 4 | 7 | 4 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
2 | 1 | 2 | 0 | 1 | 3 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 2 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
42 | 68 | 83 | 34 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
24 | 64 | 37 | 102 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
16 | 53 | 90 | 68 |
ATP8 (size: 201 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: MPQLDTSTWFIMIMSMFLVLFIIFQLKISKHSFYFNPEPMLTKTQKQNIPWETKWTKIYLPLLLPQ* | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
4 | 3 | 4 | 1 | 1 | 3 | 0 | 3 | 5 | 0 | 1 | 0 | 0 | 0 | 1 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 2 | 0 | 0 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
1 | 3 | 2 | 0 | 1 | 2 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
1 | 2 | 0 | 1 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
4 | 17 | 27 | 19 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
4 | 15 | 20 | 28 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
4 | 17 | 34 | 12 |
COX1 (size: 1545 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
31 | 8 | 26 | 10 | 5 | 25 | 7 | 12 | 6 | 0 | 12 | 3 | 20 | 2 | 23 | 19 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
7 | 1 | 0 | 13 | 11 | 15 | 0 | 7 | 10 | 24 | 6 | 10 | 6 | 12 | 0 | 4 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
12 | 21 | 1 | 10 | 3 | 13 | 1 | 0 | 3 | 12 | 7 | 1 | 1 | 9 | 11 | 6 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
11 | 9 | 1 | 4 | 10 | 7 | 2 | 1 | 2 | 5 | 0 | 0 | 0 | 1 | 0 | 16 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
147 | 106 | 142 | 120 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
76 | 132 | 96 | 211 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
29 | 121 | 212 | 153 |
COX2 (size: 684 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
11 | 6 | 13 | 3 | 1 | 12 | 1 | 15 | 6 | 0 | 5 | 2 | 4 | 2 | 3 | 3 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 0 | 2 | 2 | 3 | 3 | 0 | 2 | 1 | 5 | 0 | 2 | 4 | 7 | 0 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
3 | 12 | 0 | 8 | 3 | 4 | 1 | 1 | 4 | 6 | 4 | 1 | 2 | 2 | 3 | 4 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
4 | 12 | 3 | 5 | 5 | 5 | 1 | 0 | 1 | 5 | 0 | 0 | 0 | 1 | 0 | 4 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
54 | 50 | 67 | 57 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
26 | 55 | 61 | 86 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
14 | 49 | 108 | 57 |
COX3 (size: 784 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
14 | 3 | 8 | 7 | 3 | 14 | 3 | 5 | 7 | 0 | 2 | 8 | 5 | 0 | 11 | 13 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 2 | 5 | 5 | 5 | 0 | 1 | 10 | 9 | 0 | 3 | 3 | 6 | 0 | 5 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
8 | 9 | 1 | 3 | 3 | 8 | 1 | 3 | 2 | 6 | 5 | 2 | 0 | 2 | 5 | 5 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
12 | 7 | 1 | 1 | 2 | 2 | 0 | 0 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 10 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
61 | 68 | 63 | 69 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
44 | 65 | 55 | 97 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
9 | 87 | 97 | 68 |
CYTB (size: 1140 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
28 | 16 | 12 | 7 | 14 | 28 | 3 | 6 | 5 | 1 | 6 | 4 | 8 | 0 | 14 | 12 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 4 | 2 | 4 | 18 | 0 | 1 | 6 | 14 | 3 | 3 | 6 | 12 | 2 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
7 | 17 | 0 | 5 | 5 | 9 | 1 | 1 | 2 | 10 | 4 | 0 | 1 | 10 | 8 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
9 | 6 | 0 | 4 | 7 | 9 | 0 | 0 | 1 | 7 | 0 | 1 | 0 | 0 | 0 | 12 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
83 | 101 | 113 | 83 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
52 | 92 | 76 | 160 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
12 | 109 | 164 | 95 |
ND1 (size: 957 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
19 | 15 | 14 | 5 | 7 | 27 | 4 | 13 | 7 | 0 | 1 | 3 | 9 | 1 | 13 | 9 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 0 | 1 | 4 | 10 | 14 | 0 | 0 | 6 | 4 | 2 | 5 | 9 | 7 | 1 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
2 | 14 | 0 | 4 | 5 | 10 | 0 | 1 | 3 | 8 | 3 | 1 | 0 | 6 | 6 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
1 | 10 | 1 | 2 | 1 | 5 | 1 | 0 | 1 | 6 | 1 | 0 | 0 | 1 | 0 | 8 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
68 | 83 | 92 | 76 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
34 | 87 | 54 | 144 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
16 | 82 | 149 | 72 |
ND2 (size: 1044 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
23 | 13 | 39 | 7 | 9 | 25 | 3 | 9 | 10 | 0 | 3 | 2 | 6 | 1 | 8 | 6 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 0 | 0 | 6 | 4 | 8 | 0 | 0 | 6 | 7 | 1 | 4 | 6 | 9 | 2 | 10 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
9 | 17 | 0 | 3 | 7 | 14 | 2 | 0 | 2 | 6 | 2 | 0 | 1 | 9 | 7 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
5 | 5 | 0 | 1 | 0 | 9 | 4 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 10 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
50 | 83 | 146 | 69 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
29 | 101 | 59 | 159 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
19 | 78 | 171 | 80 |
ND3 (size: 1044 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
23 | 13 | 39 | 7 | 9 | 25 | 3 | 9 | 10 | 0 | 3 | 2 | 6 | 1 | 8 | 6 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 0 | 0 | 6 | 4 | 8 | 0 | 0 | 6 | 7 | 1 | 4 | 6 | 9 | 2 | 10 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
9 | 17 | 0 | 3 | 7 | 14 | 2 | 0 | 2 | 6 | 2 | 0 | 1 | 9 | 7 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
5 | 5 | 0 | 1 | 0 | 9 | 4 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 10 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
50 | 83 | 146 | 69 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
29 | 101 | 59 | 159 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
19 | 78 | 171 | 80 |
ND4 (size: 1378 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
31 | 8 | 27 | 13 | 19 | 37 | 4 | 16 | 11 | 0 | 4 | 5 | 7 | 1 | 11 | 10 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
5 | 2 | 1 | 3 | 12 | 10 | 2 | 3 | 7 | 8 | 0 | 3 | 8 | 8 | 0 | 6 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
13 | 20 | 0 | 8 | 11 | 10 | 1 | 4 | 9 | 9 | 7 | 0 | 6 | 9 | 12 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
9 | 8 | 1 | 1 | 2 | 10 | 1 | 1 | 1 | 8 | 0 | 0 | 0 | 0 | 0 | 13 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
74 | 125 | 155 | 105 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
57 | 115 | 83 | 204 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
21 | 134 | 193 | 111 |
ND4L (size: 297 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
3 | 1 | 6 | 2 | 3 | 10 | 1 | 7 | 2 | 0 | 1 | 1 | 5 | 0 | 2 | 2 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
5 | 0 | 3 | 2 | 0 | 6 | 0 | 2 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
2 | 2 | 1 | 2 | 6 | 1 | 0 | 0 | 1 | 3 | 1 | 0 | 0 | 3 | 2 | 1 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
1 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
22 | 22 | 27 | 28 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
9 | 24 | 17 | 49 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
7 | 24 | 45 | 23 |
ND5 (size: 1821 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
39 | 23 | 39 | 12 | 12 | 40 | 3 | 17 | 18 | 0 | 1 | 6 | 7 | 1 | 29 | 21 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
4 | 2 | 3 | 9 | 15 | 19 | 2 | 4 | 11 | 11 | 2 | 6 | 9 | 11 | 0 | 8 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
14 | 28 | 1 | 12 | 9 | 12 | 1 | 4 | 10 | 5 | 10 | 0 | 1 | 12 | 25 | 3 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
10 | 9 | 3 | 3 | 7 | 21 | 2 | 2 | 3 | 3 | 0 | 0 | 0 | 1 | 0 | 12 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
110 | 132 | 230 | 135 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
67 | 156 | 129 | 255 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
20 | 188 | 248 | 151 |
ND6 (size: 528 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
16 | 1 | 5 | 2 | 0 | 0 | 0 | 11 | 1 | 1 | 7 | 1 | 7 | 6 | 13 | 0 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
5 | 1 | 0 | 4 | 1 | 1 | 2 | 10 | 1 | 7 | 8 | 3 | 0 | 0 | 0 | 4 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
0 | 2 | 3 | 5 | 0 | 0 | 2 | 5 | 0 | 8 | 2 | 2 | 6 | 2 | 1 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
0 | 2 | 7 | 3 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
68 | 8 | 47 | 53 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
37 | 27 | 32 | 80 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
44 | 8 | 40 | 84 |
Total protein-coding genes (size: 11406 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
241 | 105 | 209 | 88 | 82 | 246 | 36 | 126 | 89 | 3 | 45 | 36 | 86 | 16 | 139 | 110 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
42 | 7 | 16 | 55 | 79 | 107 | 6 | 32 | 61 | 99 | 24 | 47 | 55 | 84 | 6 | 52 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
79 | 163 | 10 | 62 | 56 | 91 | 11 | 23 | 40 | 76 | 49 | 8 | 19 | 70 | 93 | 31 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
65 | 79 | 19 | 26 | 38 | 81 | 14 | 7 | 14 | 41 | 1 | 1 | 0 | 8 | 1 | 96 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
808 | 895 | 1223 | 875 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
470 | 963 | 742 | 1626 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
216 | 978 | 1606 | 1001 |
Failed to understand id: ?term=("Muntiacus reevesi"[Organism]) AND (refseq[filter] AND mitochondrion[filter])